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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs5995107 chr22:35892800 A/G PES1 chr22:30972612-31003070:- -0.44 -6.26 8.75E-10 Box Plot
THCA rs5995107 chr22:35892800 A/G PICK1 chr22:38452318-38471708:+ -0.52 -7.1 4.42E-12 Box Plot
THCA rs5995107 chr22:35892800 A/G PMM1 chr22:41972898-41985894:- -0.44 -5.99 4.02E-9 Box Plot
THCA rs5995107 chr22:35892800 A/G POLR3H chr22:41921808-41940610:- -0.5 -6.22 1.09E-9 Box Plot
THCA rs5995107 chr22:35892800 A/G RANGAP1 chr22:41641615-41682255:- -0.41 -5.91 6.62E-9 Box Plot
THCA rs5995107 chr22:35892800 A/G RBX1 chr22:41347351-41369313:+ -0.37 -6.4 3.8E-10 Box Plot
THCA rs5995107 chr22:35892800 A/G RNF215 chr22:30764800-30817760:- -0.48 -6.55 1.53E-10 Box Plot
THCA rs5995107 chr22:35892800 A/G RPS19BP1 chr22:39925098-39928860:- -0.34 -5.96 4.98E-9 Box Plot
THCA rs5995107 chr22:35892800 A/G SAPS2 chr22:50781760-50883514:+ -0.58 -6.89 1.76E-11 Box Plot
THCA rs5995107 chr22:35892800 A/G SCO2 chr22:50961997-50964868:- -0.33 -6.25 9.09E-10 Box Plot
THCA rs5995107 chr22:35892800 A/G SELO chr22:50639408-50656045:+ -0.4 -6.52 1.76E-10 Box Plot
THCA rs5995107 chr22:35892800 A/G ST13 chr22:41220539-41253026:- -0.49 -6.48 2.27E-10 Box Plot
THCA rs5995107 chr22:35892800 A/G TFIP11 chr22:26887191-26908471:- -0.56 -6.29 7.31E-10 Box Plot
THCA rs5995107 chr22:35892800 A/G TOMM22 chr22:39077953-39081426:+ -0.49 -6.44 2.91E-10 Box Plot
THCA rs5995107 chr22:35892800 A/G TRMU chr22:46726772-46753237:+ -0.38 -6.34 5.42E-10 Box Plot